From markw at illuminae.com  Fri Oct 23 09:20:14 2009
From: markw at illuminae.com (Mark)
Date: Fri, 23 Oct 2009 06:20:14 -0700
Subject: [MOBY-l] Fwd: Questions of BioMOBY
In-Reply-To: <b94006dd0910230613g60d594deq260281f3264e3d3a@mail.gmail.com>
References: <b94006dd0910230613g60d594deq260281f3264e3d3a@mail.gmail.com>
Message-ID: <op.u188n0wndeqt07@bighome>

From: "YONG-ZHUANG LIU" <yzhuangliu at gmail.com>

Hello,

I am a graduate student in China, I found BioMOBY is related to my  
research and I am interested in it.  I want to know which ontology BioMOBY  
nowadays uses, is it myGrid ontology, which relation the two hava, is  
BioMOBY ontology written by RDF/OWL? Could provide a solution for me?

Thank you very much!


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From markw at illuminae.com  Fri Oct 23 11:22:02 2009
From: markw at illuminae.com (Mark Wilkinson)
Date: Fri, 23 Oct 2009 08:22:02 -0700
Subject: [MOBY-l] Fwd: Questions of BioMOBY
In-Reply-To: <op.u188n0wndeqt07@bighome>
References: <b94006dd0910230613g60d594deq260281f3264e3d3a@mail.gmail.com>
	<op.u188n0wndeqt07@bighome>
Message-ID: <op.u19ea0qfnbznux@dd0710001l.icapture.ubc.ca>

Hello!

I'll do my best to answer your questions - please send questions directly  
to the BioMoby mailing list for faster responses:  moby-l at biomoby.org

BioMoby uses different ontologies for different purposes.  We have three  
ontologies that are specific to the BioMoby project.  These are available  
in RDF at the following addresses:

Object:  http://biomoby.org/RESOURCES/MOBY-S/Objects
Namespace: http://biomoby.org/RESOURCES/MOBY-S/Namespaces
Service:  http://biomoby.org/RESOURCES/MOBY-S/Services

In addition we use the myGrid ontology to describe our service interfaces:
http://www.mygrid.org.uk/mygrid-moby-service/

Every BioMoby service is an owlIndividual of the mygrid:serviceDescription  
class.

To get a complete RDF dump of all BioMoby service instances, go to:
http://biomoby.org/RESOURCES/MOBY-S/ServiceInstances

I hope that's what you needed!

Best wishes!

Mark





On Fri, 23 Oct 2009 06:20:14 -0700, Mark <markw at illuminae.com> wrote:

> From: "YONG-ZHUANG LIU" <yzhuangliu at gmail.com>
>
> Hello,
>
> I am a graduate student in China, I found BioMOBY is related to my
> research and I am interested in it.  I want to know which ontology  
> BioMOBY
> nowadays uses, is it myGrid ontology, which relation the two hava, is
> BioMOBY ontology written by RDF/OWL? Could provide a solution for me?
>
> Thank you very much!
>
>


-- 
Mark D Wilkinson, PI Bioinformatics
Assistant Professor, Medical Genetics
The James Hogg iCAPTURE Centre for Cardiovascular and Pulmonary Research
Providence Heart + Lung Institute
University of British Columbia - St. Paul's Hospital
Vancouver, BC, Canada